* Indicates
listing on more than one bibliography.
N.C. Seeman, MIND3:
A FORTRAN Patterson Superposition Program for the IBM 1130. In:
Crystallographic Computing, F.R. Ahmed, ed., Munksgaard, Copenhagen (1970), pp.
87-89.
B. Berking and
N.C. Seeman, The Crystal and Molecular Structure of
1,6;2,3-Dianhydro-b-D-gulopyranose. Acta Crystallographica B27,1752-1760
(1971).
N.C. Seeman,
J.L. Sussman, H.M. Berman and S.-H. Kim, Nucleic Acid Conformation: The Crystal
Structure of a Naturally Occurring Dinucleoside Phosphate (UpA). Nature New
Biology 233, 90-92 (1971).
N.C. Seeman,
E.L. McGandy and R.D. Rosenstein, The Crystal and Molecular Structure of
Pyrazole-3-L-Alanine. Journal of the American Chemical Society 94, 1717-1720
(1972).
J.J. Madden,
E.L. McGandy and N.C. Seeman, The Crystal Structure of the Orthorhombic Form of
L-(+)-Histidine. Acta Crystallographica B28, 2377-2382 (1972).
J.J. Madden,
E.L. McGandy, N.C. Seeman, M.M. Harding and A. Hoy, The Crystal Structure of
the Monoclinic Form of L-(+)-Histidine. Acta Crystallographica B28, 2382-2389
(1972).
J.L. Sussman,
N.C. Seeman, S.-H. Kim and H.M. Berman, The Crystal Structure of a Naturally
Occurring Dinucleoside Phosphate: Uridylyl-3',5'-adenosine. Model for RNA Chain
Folding. Journal of Molecular Biology 66, 403-421 (1972).
N.C. Seeman,
Determinata la Struttura Cristallina di un Dinucleosidofosfato Naturale (UpA).
In: Enciclopedia Della Scienze E Della Tecnica, Annuario Della EST, Mondadori,
Milano (1972), pp. 68-69 (in Italian).
S.-H. Kim,
H.M. Berman, N.C. Seeman and M.D. Newton, Seven Basic Conformations of Nucleic
Acid Structural Units. Acta Crystallographica B29, 703-710 (1973).
J.M.
Rosenberg, N.C. Seeman, J.-J.P. Kim, F.L. Suddath, H.B. Nicholas and A. Rich,
Double Helix at Atomic Resolution. Nature 243, 150-154 (1973).
R.O. Day, N.C.
Seeman, J.M. Rosenberg and A. Rich, A Crystalline Fragment of the Double Helix:
The Structure of the Dinucleoside Phosphate Guanylyl-3',5'-cytidine.
Proceedings of the National Academy of Sciences (USA) 70, 849-853 (1973).
S.-H. Kim,
F.L. Suddath, G.J. Quigley, A. McPherson, J.L. Sussman, A.H.-J. Wang, N.C.
Seeman and A. Rich, The Three Dimensional Tertiary Structure of Transfer RNA.
Science 185, 435-440 (1974).
S.-H. Kim,
J.L. Sussman, G.J. Quigley, F.L. Suddath, A. McPherson, A.H.-J. Wang, N.C.
Seeman and A. Rich, A Generalized Structure for Transfer RNA. Proceedings of
the National Academy of Sciences (USA) 71, 4970-4974 (1974).
N.C. Seeman,
R.O. Day and A. Rich, Nucleic Acid-Mutagen Interactions: The Crystal Structure
of Adenylyl-3',5'-uridine Plus 9-Aminoacridine. Nature 253, 324-326 (1975).
G.J. Quigley,
A.H.-J. Wang, N.C. Seeman, F.L. Suddath, A. Rich, J.L. Sussman and S.-H. Kim,
Hydrogen Bonding in Yeast Phenylalanine Transfer RNA. Proceedings of the
National Academy of Sciences (USA) 72, 4866-4870 (1975).
G.J. Quigley,
N.C. Seeman, A.H.-J. Wang, F.L. Suddath and A. Rich, Yeast Phenylalanine
Transfer RNA: Atomic Coordinates and Torsion Angles. Nucleic Acids Research 2,
2329-2341 (1975).
S.-H Kim, F.L.
Suddath, G.J. Quigley, A. McPherson, J.L. Sussman, A.H.-J. Wang, N.C. Seeman
and A. Rich, The Tertiary Structure of Yeast Phenylalanine Transfer RNA. In:
Structure and Conformations of Nucleic Acids and Protein-Nucleic Acid
Interactions, ed by M. Sundaralingam and S.T. Rao, University Park Press,
Baltimore, (1975) pp. 7-14.
N.C. Seeman,
J.M. Rosenberg and A. Rich, Sequence Specific Recognition of Double Helical
Nucleic Acids by Proteins. Proceedings of the National Academy of Sciences
(USA) 73, 804-808 (1976).
J.M Rosenberg,
N.C. Seeman, R.O. Day and A. Rich, RNA Double Helices Derived from Studies of
Small Fragments. Biochemical and Biophysical Research Communications 69,
979-987 (1976).
A. Rich and
N.C. Seeman, RNA Double Helices at Atomic Resolution. In: Handbook of
Biochemistry and Molecular Biology, vol II, 3rd edition, ed. by G. Fasman, CRC
Press, Cleveland (1976), pp. 413-419.
N.C. Seeman,
J.M Rosenberg, F.L. Suddath, J.-J.P. Kim and A. Rich, RNA Double Helical
Fragments at Atomic Resolution I: The Crystal and Molecular Structure of
Adenylyl-3',5'-uridine Hexahydrate. Journal of Molecular Biology 104, 109-144
(1976).
J.M.
Rosenberg, N.C. Seeman, R.O. Day and A. Rich, RNA Double Helical Fragments at
Atomic Resolution II: The Crystal and Molecular Structure of
Guanylyl-3',5'-cytidine Nonahydrate. Journal of Molecular Biology 104, 145-167
(1976).
A. Rich, N.C.
Seeman and J.M. Rosenberg, Protein Recognition of Base Pairs in a Double Helix.
In: Nucleic Acid-Protein Recognition, ed. by H.G. Vogel, Academic Press, New
York (1977), pp. 361-374.
N.H. Woo, N.C.
Seeman and A. Rich, The Crystal Structure of Putrescine Diphosphate: A Model
for Amine-Nucleic Acid Interactions. Biopolymers 18, 539-552 (1979).
N.C. Seeman,
Single Crystal Crystallography. In: Stereodynamics of Molecular Systems, ed. by
R.H. Sarma, Pergamon Press, New York (1979), pp. 75-109.
N.C. Seeman,
Single Crystal Crystallography for Nucleic Acid Structural Studies. In:
Geometry and Dynamics of Nucleic Acids, ed. by R.H. Sarma, Pergamon Press, New
York (1980), pp. 47-82.
N.C. Seeman,
Crystallographic Investigation of Oligonucleotide Structure. In: Geometry and
Dynamics of Nucleic Acids, ed. by R.H. Sarma, Pergamon Press, New York (1980),
pp. 109-142.
J.F. Hyde,
J.A. Zubieta and N.C. Seeman, The Crystal and Molecular Structure of
((Mo(S-CH2-CH2-S-CH2-CH2-S)2)2Ag)PF6.1/2 DMF, A Thiolate-Bridged Mixed Metal
Cluster. Inorganica Chemica Acta 54, L137-L139 (1981).
J.A. DiVerdi,
S.J. Opella, R.-I. Ma, N.R. Kallenbach and N.C. Seeman, 31P NMR of DNA in
Eukaryotic Chromosomal Complexes. Biochemical and Biophysical Research
Communications 102, 885-890 (1981).
R.D.
Rosenstein, M. Oberding, J. Hyde, J.A. Zubieta, K.D. Karlin and N.C. Seeman,
The Crystal Structure of Hypoxanthinium Nitrate Monohydrate: Intercalation of
Water Between Purines. Crystal Structure Communications 11, 1507-1513 (1982).
R.D. Sheardy
and N.C. Seeman, The Construction of an Oligonucleotide Containing
5-Iodo-Deoxyuridine. Journal of Organic Chemistry 51, 4301-4303 (1986).
J.-H. Chen,
N.C. Seeman and N.R. Kallenbach, Tracts of A-T Nucleotide Pairs Retard the
Electrophoretic Mobility of Short DNA Duplexes. Nucleic Acids Research 16,
6803-6812 (1988).
V.N. Morozov,
J. Sherman, N.R. Kallenbach, S.M. Du and N.C. Seeman, A Scanning Tunneling Microscopy
Study of the Formation and Chemical Activation of Step Defects on the Basal
Plane of Pyrolytic Graphite, Journal of Microscopy 170, pt. 3, 237-245 (1993).
V.N. Morozov,
N.C. Seeman and N.R. Kallenbach, New Methods for Depositing and Imaging Molecules
in Scanning-Tunneling Microscopy, Scanning Microscopy International 7, 757-779
(1994).
*H. Qiu, J.C.
Dewan and N.C. Seeman, A DNA Decamer with a Sticky End: The Crystal Structure
of d-CGACGATCGT. J. Mol. Biol. 267, 881-898 (1997).
*A. V.
Vologodskii, X. Yang and N.C. Seeman, Non-Complementary DNA Helical Structure
Induced by Positive Torsional Stress, Nucleic Acids Resesrch 26, 1503-1508
(1998).
*A.
Podtelezhnikov, C. Mao, N.C. Seeman & A. Vologodskii,
Multimerization-Cyclization of DNA Fragments as a Method of Conformational
Analysis, Biophys. J. 79, 2692-2704 (2000).
*R. Sha, F.
Liu and N.C. Seeman, Atomic Force Measurement of the Interdomain Angle in
Symmetric Holliday Junctions, Biochemistry 41, 5950-5955 (2002).
L. Zhu, O. dos
Santos, N.C. Seeman and J.W. Canary, Reaction of N3-Benzoyl-3',
5'-O-(di-tert-butylsilanediyl)uridine with Hindered Electrophiles:
Intermolecular N3 to 2'-O Protecting Group Transfer, Nucleosides, Nucleotides
& Nucleic Acids 21, 723-735 (2002).
*P. Sa-Ardyen,
A.V. Vologodskii and N.C. Seeman, The Flexibility of DNA Double Crossover
Molecules. Biophysical Journal 84, 3829-3837 (2003).
*P.S.
Lukeman, A. Mittal, & N.C. Seeman, Two Dimensional PNA/DNA Arrays: Estimating the Helicity of Unusual
Nucleic Acid Polymers, Chemical Communications 2004, 1694-1695 (2004).
P.
Paukstelis, J. Nowakowski, J.J.
Birktoft and N.C. Seeman, The Crystal Structure of a Continuous
Three-Dimensional DNA Lattice, Chemistry and Biology 1`1, 1119-1126 (2004).
*W.
Shen, M. Bruist, S. Goodman & N.C. Seeman, A Nanomechanical Device for Measuring the Excess
Binding Energy of Proteins that Distort DNA, Angew.
Chem. Int. Ed. 43, 4750-4752 (2004); Angew.Chem. 116, 4854-4856 (2004).
* W.B.
Sherman & N.C. Seeman, Design of Low-Stress Nucleic Acid Nanotubes, Bioiphys.
J., 90, 4546-4557
(2006).
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